PhD Position in Theoretical/Computational Chemistry
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Odense M
A fully financed three-year PhD position in theoretical/computational chemistry is available for a highly motivated applicant at the Department of Physics, Chemistry and Pharmacy (FKF) at the University of Southern Denmark starting from 1 January 2023, or as soon as possible thereafter. The position is financed through the Independent Research Fund Denmark – FNU. Application deadline: 15 November 2022.
Project Background
The research project will consist of - in roughly equal parts – theory/algorithm development and computational modelling within the cross field of theoretical/computational chemistry and molecular biophysics. The broad focus of the research project will be on studying electronic processes in complex and biological environments, and the developed methods will rely extensively on quantum mechanical formulations.
Specifically, the PhD candidate will develop and use biologically oriented computational and simulation techniques to unravel the molecular basis of optogenetics as well as develop rational design strategies for novel microbial rhodopsins possessing optical and mechanical properties for the benefit of the development of optogenetics as a tool to gain information concerning the function of the brain. The research project will be focused on the following three research aims:
1) Obtaining a molecular basis understanding of the working mechanisms in microbial rhodopsins when activated by light;
2) Development of rational design strategies for colour tuning of novel microbial rhodopsin variants; and
3) Development of rational design strategies for novel microbial rhodopsin variants that can be activated by multiphoton approaches.
To a high degree these research aims will be addressed based on quantum chemical embedding strategies and especially the so-called Polarizable Embedding (PE) and Polarizable Density Embedding (PDE) models.
The project is led by Professor Jacob Kongsted.
Qualifications
The ideal candidate holds a Master's degree or equivalent in theoretical (bio)physics, theoretical chemistry, applied computational science or related field. Furthermore, the candidate should show ability to work independently as well as have good communication skills. The candidate should have knowledge in one of the following programming languages: C/C++, Python or Fortran. Experience in computational chemistry/physics and/or biomolecular simulations is a prerequisite.
Note that this call is also open for students entering into a 4+4 PhD programme.
For further information contact Professor Jacob Kongsted, [email protected].
Application, salary etc.
Appointment as a PhD Research Fellow is for three (students who have completed their MSc) or four years (students who have not yet completed their MSc). Employment stops automatically at the end of the period. The holder of the scholarship is not allowed to have other paid employment during the three-year period.
The successful applicant will be employed in accordance with the agreement on salaried PhD scholars between the Ministry of Finance and AC (the Danish Confederation of Professional Associations). Please check links for more information on salary and taxation.
The successful candidate will be enrolled at this university in accordance with faculty regulations and the Danish Ministerial Order on the PhD Programme at the Universities (PhD order).
The University wishes our staff to reflect the diversity of society and thus welcomes applications from all qualified candidates regardless of personal background.
Application must be made in the form of a Declaration of Interest including the following:
• A research proposal/description of your approach to the above project (max one page excluding references)
• A letter stating your specific interest, motivation and qualifications for the project in question (max. two pages) (please attach this under box "Application form")
• Detailed CV, including personal contact information
• Copies of diplomas, Bachelor as well as Master’s degree, including transcript of notes/grades
• At least two signed reference letters. Should your referees wish to send their letters directly to us, please have them use e-mail: [email protected] mentioning your name and the title of the position in the subject line. And please note that these also need to reach us before deadline.
Shortlisting may be used in the assessment process.
Further information about the PhD-study can be found at the homepage of the University.
Applications must be submitted electronically using the link "Apply online". Attached files must be in Adobe PDF or Word format. Each box can only contain a single file of max. 10 Mb. We strongly recommend that you read How to apply before you apply.
Incomplete applications and applications received after the deadline will neither be considered nor evaluated. This also applies to reference letters.
Further information for international applicants about entering and working in Denmark.
Project Background
The research project will consist of - in roughly equal parts – theory/algorithm development and computational modelling within the cross field of theoretical/computational chemistry and molecular biophysics. The broad focus of the research project will be on studying electronic processes in complex and biological environments, and the developed methods will rely extensively on quantum mechanical formulations.
Specifically, the PhD candidate will develop and use biologically oriented computational and simulation techniques to unravel the molecular basis of optogenetics as well as develop rational design strategies for novel microbial rhodopsins possessing optical and mechanical properties for the benefit of the development of optogenetics as a tool to gain information concerning the function of the brain. The research project will be focused on the following three research aims:
1) Obtaining a molecular basis understanding of the working mechanisms in microbial rhodopsins when activated by light;
2) Development of rational design strategies for colour tuning of novel microbial rhodopsin variants; and
3) Development of rational design strategies for novel microbial rhodopsin variants that can be activated by multiphoton approaches.
To a high degree these research aims will be addressed based on quantum chemical embedding strategies and especially the so-called Polarizable Embedding (PE) and Polarizable Density Embedding (PDE) models.
The project is led by Professor Jacob Kongsted.
Qualifications
The ideal candidate holds a Master's degree or equivalent in theoretical (bio)physics, theoretical chemistry, applied computational science or related field. Furthermore, the candidate should show ability to work independently as well as have good communication skills. The candidate should have knowledge in one of the following programming languages: C/C++, Python or Fortran. Experience in computational chemistry/physics and/or biomolecular simulations is a prerequisite.
Note that this call is also open for students entering into a 4+4 PhD programme.
For further information contact Professor Jacob Kongsted, [email protected].
Application, salary etc.
Appointment as a PhD Research Fellow is for three (students who have completed their MSc) or four years (students who have not yet completed their MSc). Employment stops automatically at the end of the period. The holder of the scholarship is not allowed to have other paid employment during the three-year period.
The successful applicant will be employed in accordance with the agreement on salaried PhD scholars between the Ministry of Finance and AC (the Danish Confederation of Professional Associations). Please check links for more information on salary and taxation.
The successful candidate will be enrolled at this university in accordance with faculty regulations and the Danish Ministerial Order on the PhD Programme at the Universities (PhD order).
The University wishes our staff to reflect the diversity of society and thus welcomes applications from all qualified candidates regardless of personal background.
Application must be made in the form of a Declaration of Interest including the following:
• A research proposal/description of your approach to the above project (max one page excluding references)
• A letter stating your specific interest, motivation and qualifications for the project in question (max. two pages) (please attach this under box "Application form")
• Detailed CV, including personal contact information
• Copies of diplomas, Bachelor as well as Master’s degree, including transcript of notes/grades
• At least two signed reference letters. Should your referees wish to send their letters directly to us, please have them use e-mail: [email protected] mentioning your name and the title of the position in the subject line. And please note that these also need to reach us before deadline.
Shortlisting may be used in the assessment process.
Further information about the PhD-study can be found at the homepage of the University.
Applications must be submitted electronically using the link "Apply online". Attached files must be in Adobe PDF or Word format. Each box can only contain a single file of max. 10 Mb. We strongly recommend that you read How to apply before you apply.
Incomplete applications and applications received after the deadline will neither be considered nor evaluated. This also applies to reference letters.
Further information for international applicants about entering and working in Denmark.
Information og data
Denne ledige stilling har jobtypen "Forsker", og befinder sig i kategorien "Sundhed og forskning".
Arbejdsstedet er beliggende i Odense M.
Jobbet er oprettet på vores service den 18.10.2022, men kan have været deaktiveret og genaktiveret igen.
Dagligt opdateret: Dette job opdateres dagligt ud fra jobudbyderens hjemmeside via vores søgemaskineteknologi og er aktivt lige nu.
- Forsker
- Odense M
- Tirsdag den 15. november 2022
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