Bioinformatician for the Metabolomics Platform
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Bioinformatician for the Metabolomics Platform
Novo Nordisk Foundation Center for Basic Metabolic Research
Faculty of Health and Medical Sciences
University of Copenhagen
We are looking for a motivated bioinformatician with extensive experience in developing computational tools and building data workflows/pipelines to support the work at the Metabolomics Platform. The position will commence October 1, 2022, or after agreement.
Our research
The Center (CBMR) was established in 2010 through a generous, unrestricted grant from the Novo Nordisk Foundation (NNF). The vision of the Center is to strengthen interdisciplinary research that transforms our basic understanding of the mechanisms of metabolic health and disease, and to accelerate this knowledge toward new prevention and treatment strategies. In 2018, the Center obtained new strategic funding from NNF including substantial funding to establish and/or develop five enabling biology and technology platforms in support of the new research strategy. Read more about us at http://cbmr.ku.dk.
The Metabolomics Platform at CBMR was established in 2019. The aim of the platform is to apply and develop metabolomics-, data science- and systems biology tools to broaden the understanding of metabolites involved in the pathogenesis of metabolic disease. You can read more about the platform at https://cbmr.ku.dk/researchfacilities/metabolomics.
Your job
A position as bioinformatician is available at the Metabolomics Platform.
Key responsibilities:
Your profile
Essential criteria:
Desirable criteria:
Place of employment
The place of employment is at the Novo Nordisk Foundation Center for Basic Metabolic Research, Maersk Tower, Faculty of Health and Medical Sciences, University of Copenhagen. We offer creative and stimulating working conditions in a dynamic and international research environment.
Terms of salary and employment
The employment as Staff Scientist is a full time and permanent position. Starting date is October 1, 2022, or after agreement. Employment will be in accordance with the provisions of the collective agreement between the Danish Ministry of Finance and AC (the Danish Confederation of Professional Associations). Depending on prior experiences and qualifications a salary supplement may be negotiated.
Questions
For further questions about the job description and qualifications, please contact Professor Thomas Moritz at [email protected]. For questions regarding the recruitment procedure, please contact SUND HR CBMR at [email protected].
Application
Your application in English should include:
Please submit your application by clicking on “Apply Now” below.
Application deadline: July 11, 2022.
We reserve the right not to consider material received after the deadline, and not to consider applications that do not live up to the abovementioned requirements.
The University of Copenhagen wishes to reflect the diversity of society and welcome applications from all qualified candidates regardless of personal background.
Kilde: Jobnet.dk
Novo Nordisk Foundation Center for Basic Metabolic Research
Faculty of Health and Medical Sciences
University of Copenhagen
We are looking for a motivated bioinformatician with extensive experience in developing computational tools and building data workflows/pipelines to support the work at the Metabolomics Platform. The position will commence October 1, 2022, or after agreement.
Our research
The Center (CBMR) was established in 2010 through a generous, unrestricted grant from the Novo Nordisk Foundation (NNF). The vision of the Center is to strengthen interdisciplinary research that transforms our basic understanding of the mechanisms of metabolic health and disease, and to accelerate this knowledge toward new prevention and treatment strategies. In 2018, the Center obtained new strategic funding from NNF including substantial funding to establish and/or develop five enabling biology and technology platforms in support of the new research strategy. Read more about us at http://cbmr.ku.dk.
The Metabolomics Platform at CBMR was established in 2019. The aim of the platform is to apply and develop metabolomics-, data science- and systems biology tools to broaden the understanding of metabolites involved in the pathogenesis of metabolic disease. You can read more about the platform at https://cbmr.ku.dk/researchfacilities/metabolomics.
Your job
A position as bioinformatician is available at the Metabolomics Platform.
Key responsibilities:
- Develop bioinformatics and computational tools for researchers
- Develop cheminformatics strategies for metabolite annotation in untargeted metabolomics
- Design and improve automated pipelines for current and new data processing
- Develop and maintain databases for the platform
- Work closely with other scientists in the platform and other research groups at the CBMR to understand data processing challenges and provide custom solutions
Your profile
Essential criteria:
- Ph.D. or master degree in bioinformatics, data science, computational biology or a related field
- Experience with mass spectrometry-based data
- Experience in working with GNPS (Global Natural Product Social Molecular Networking) for annotation and classifying of mass spectra.
- Experience in data preprocessing of untargeted metabolomics data, using software as XCMS and MZmine.
- Experience in data analysis of metabolomics data, including multivariate and univariate statistical analysis.
- Experience with building and optimizing data pipelines and architectures
- Proficiency in one or more programming languages such as Python, Java, JavaScript, and C++
- Ability to collaborate and work interdisciplinary
- Excellent written and oral communication skills in English
Desirable criteria:
- Experience working with Bruker LC-QTOF-MS software as Data analysis and Metaboscape.
- Familiar with the Linux/Unix system, shell scripting, and working in a high performance computing environment
Place of employment
The place of employment is at the Novo Nordisk Foundation Center for Basic Metabolic Research, Maersk Tower, Faculty of Health and Medical Sciences, University of Copenhagen. We offer creative and stimulating working conditions in a dynamic and international research environment.
Terms of salary and employment
The employment as Staff Scientist is a full time and permanent position. Starting date is October 1, 2022, or after agreement. Employment will be in accordance with the provisions of the collective agreement between the Danish Ministry of Finance and AC (the Danish Confederation of Professional Associations). Depending on prior experiences and qualifications a salary supplement may be negotiated.
Questions
For further questions about the job description and qualifications, please contact Professor Thomas Moritz at [email protected]. For questions regarding the recruitment procedure, please contact SUND HR CBMR at [email protected].
Application
Your application in English should include:
- Motivation letter (max one page)
- Curriculum vitae
- Complete publication list
- Copies of relevant certificate(s) of education
Please submit your application by clicking on “Apply Now” below.
Application deadline: July 11, 2022.
We reserve the right not to consider material received after the deadline, and not to consider applications that do not live up to the abovementioned requirements.
The University of Copenhagen wishes to reflect the diversity of society and welcome applications from all qualified candidates regardless of personal background.
Kilde: Jobnet.dk
Information og data
Denne ledige stilling har jobtypen "Biolog", og befinder sig i kategorien "Sundhed og forskning".
Arbejdsstedet er beliggende i København N.
Jobbet er oprettet på vores service den 29.6.2022, men kan have været deaktiveret og genaktiveret igen.
Dagligt opdateret: Dette job opdateres dagligt ud fra jobudbyderens hjemmeside via vores søgemaskineteknologi og er aktivt lige nu.
- Biolog
- København N
- Mandag den 11. juli 2022
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