Bioinformatics Development and Application in Genomic Medicine, Rigshospitalet
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The Center for Genomic Medicine at Rigshospitalet is looking for a bioinformatician or computational scientist to join our bioinformatics group that develops and maintains advanced computational pipelines for the analysis of patient genomes and transcriptomes.
The Center for Genomic Medicine holds a combined high-throughput DNA/RNA sequencing and bioinformatics platform that offers a wide-range of genomic and transcriptomic analyses, including human whole-genome sequencing, to hospitals in Region Hovedstaden and Region Sjælland. As part of the National Genome Center we further participate in and contribute with pipeline development, sequencing and quality assessment for the National genome sequencing initiative.
As part of the bioinformatics group, you will be responsible for developing and maintaining workflows for data analyses and provide bioinformatics support to clinical departments. Accordingly, responsibilities will range from making daily surveillance of automated data analysis workflows to contributing to high level publications within the field of genomic medicine.
We offer a stimulating environment where medical doctors, biologists and bioinformaticians work together to deliver high-quality precision medicine and research. Moreover, there will be a unique opportunity to work with bioinformatics and computing tools on real clinical data. Our work has direct implications for diagnosis of patients leading to better treatment for a variety of rare and more common genetic diseases, infections, and cancer.
Qualifications:
Our work is primarily focused on processing and analyzing DNA sequencing data, and we use SnakeMake for orchestration of a large variety of bioinformatics tools on a supercomputing infrastructure. Previous experience with this work, or aspects thereof, is an advantage - just like scientific understanding of molecular biology.
The application should comprise the following, to be uploaded in the application system:
Deadline for application is August 3rd, 2021. The appointment will be based on the collective agreement with relevant union. The place of work is Rigshospitalet, Blegdamsvej, Copenhagen.
For further information, contact Frederik Otzen Bagger (email: [email protected], 3545 4668).
Kilde: Jobnet.dk
The Center for Genomic Medicine holds a combined high-throughput DNA/RNA sequencing and bioinformatics platform that offers a wide-range of genomic and transcriptomic analyses, including human whole-genome sequencing, to hospitals in Region Hovedstaden and Region Sjælland. As part of the National Genome Center we further participate in and contribute with pipeline development, sequencing and quality assessment for the National genome sequencing initiative.
As part of the bioinformatics group, you will be responsible for developing and maintaining workflows for data analyses and provide bioinformatics support to clinical departments. Accordingly, responsibilities will range from making daily surveillance of automated data analysis workflows to contributing to high level publications within the field of genomic medicine.
We offer a stimulating environment where medical doctors, biologists and bioinformaticians work together to deliver high-quality precision medicine and research. Moreover, there will be a unique opportunity to work with bioinformatics and computing tools on real clinical data. Our work has direct implications for diagnosis of patients leading to better treatment for a variety of rare and more common genetic diseases, infections, and cancer.
Qualifications:
- A degree in bioinformatics, computational biology, computer science, or equivalent
- PhD in bioinformatics, genomics, or clinical data science is a plus
- Proficient in general in scripting and programming languages, including a working knowledge of Python
- Proficient with Linux-based operating systems and shell scripting.
- Experience with version control using Git
- Proficiency in lower level languages like C/C++ is a plus
- Experience with R is a plus
- Fluency in English written and spoken
- You like to work in a team and is motivated by working in an interdisciplinary environment.
Our work is primarily focused on processing and analyzing DNA sequencing data, and we use SnakeMake for orchestration of a large variety of bioinformatics tools on a supercomputing infrastructure. Previous experience with this work, or aspects thereof, is an advantage - just like scientific understanding of molecular biology.
The application should comprise the following, to be uploaded in the application system:
- A brief introductory letter outlining how you see yourself as part of the bioinformatics unit
- A curriculum vitae and a full publication list
- A short description of past and present research activities
- Relevant diplomas
Deadline for application is August 3rd, 2021. The appointment will be based on the collective agreement with relevant union. The place of work is Rigshospitalet, Blegdamsvej, Copenhagen.
For further information, contact Frederik Otzen Bagger (email: [email protected], 3545 4668).
Kilde: Jobnet.dk
Information og data
Denne ledige stilling har jobtypen "Øvrige", og befinder sig i kategorien "Øvrige stillinger".
Arbejdsstedet er beliggende i København Ø.
Jobbet er oprettet på vores service den 2.7.2021, men kan have været deaktiveret og genaktiveret igen.
Dagligt opdateret: Dette job opdateres dagligt ud fra jobudbyderens hjemmeside via vores søgemaskineteknologi og er aktivt lige nu.
- Øvrige
- København Ø
- Tirsdag den 03. august 2021
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